Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 MROH4P-201ENST00000431302 1578 ntBASIC17.05■□□□□ 0.32
CHMP4BP1P59074 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 KRT8P4-201ENST00000509735 1454 ntBASIC17.05■□□□□ 0.32
CHMP4BP1P59074 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
CHMP4BP1P59074 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 AC005077.2-201ENST00000449786 690 ntBASIC17.04■□□□□ 0.32
CHMP4BP1P59074 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 RN7SL48P-201ENST00000579283 293 ntBASIC17.04■□□□□ 0.32
CHMP4BP1P59074 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 OR10B1P-201ENST00000601666 907 ntBASIC17.04■□□□□ 0.32
CHMP4BP1P59074 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 AC009090.5-201ENST00000624886 2285 ntBASIC17.04■□□□□ 0.32
CHMP4BP1P59074 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 AL023775.1-201ENST00000454907 1746 ntBASIC17.04■□□□□ 0.32
CHMP4BP1P59074 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHMP4BP1P59074 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 CALR4P-201ENST00000431943 946 ntBASIC17.03■□□□□ 0.32
CHMP4BP1P59074 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 AC020914.3-201ENST00000594712 304 ntBASIC17.03■□□□□ 0.32
CHMP4BP1P59074 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 MYO15B-237ENST00000642007 4893 ntBASIC17.03■□□□□ 0.32
CHMP4BP1P59074 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHMP4BP1P59074 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP4BP1P59074 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP4BP1P59074 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHMP4BP1P59074 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHMP4BP1P59074 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.02■□□□□ 0.32
CHMP4BP1P59074 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms