Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
APOC4P55056 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.87□□□□□ -0.67
APOC4P55056 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
APOC4P55056 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.87□□□□□ -0.67
APOC4P55056 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 PARN-202ENST00000420015 2360 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 BCYRN1-201ENST00000418539 200 ntBASIC10.87□□□□□ -0.67
APOC4P55056 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 PUDPP3-201ENST00000445368 636 ntBASIC10.87□□□□□ -0.67
APOC4P55056 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC10.87□□□□□ -0.67
APOC4P55056 GCOM2-201ENST00000509133 1104 ntBASIC10.87□□□□□ -0.67
APOC4P55056 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC10.87□□□□□ -0.67
APOC4P55056 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC10.87□□□□□ -0.67
APOC4P55056 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC10.87□□□□□ -0.67
APOC4P55056 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 BX088702.1-201ENST00000610784 235 ntBASIC10.87□□□□□ -0.67
APOC4P55056 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.87□□□□□ -0.67
APOC4P55056 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 PPT1-215ENST00000641471 2368 ntBASIC10.87□□□□□ -0.67
APOC4P55056 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.87□□□□□ -0.67
APOC4P55056 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
APOC4P55056 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
APOC4P55056 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
APOC4P55056 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 PGR-210ENST00000619228 3038 ntTSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms