Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.3■□□□□ 0.04
ATXN3P54252 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.3■□□□□ 0.04
ATXN3P54252 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ATXN3P54252 AL354989.2-201ENST00000435838 1540 ntBASIC15.3■□□□□ 0.04
ATXN3P54252 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.3■□□□□ 0.04
ATXN3P54252 UPF3AP2-201ENST00000457924 1132 ntBASIC15.3■□□□□ 0.04
ATXN3P54252 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.3■□□□□ 0.04
ATXN3P54252 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.3■□□□□ 0.04
ATXN3P54252 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.3■□□□□ 0.04
ATXN3P54252 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
ATXN3P54252 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.3■□□□□ 0.04
ATXN3P54252 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATXN3P54252 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATXN3P54252 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 AC015967.2-201ENST00000624092 234 ntBASIC15.3■□□□□ 0.04
ATXN3P54252 AC006435.4-201ENST00000625037 234 ntBASIC15.3■□□□□ 0.04
ATXN3P54252 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
ATXN3P54252 AL356737.1-201ENST00000634391 234 ntBASIC15.3■□□□□ 0.04
ATXN3P54252 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.3■□□□□ 0.04
ATXN3P54252 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ATXN3P54252 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.3■□□□□ 0.04
ATXN3P54252 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATXN3P54252 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ATXN3P54252 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.29■□□□□ 0.04
ATXN3P54252 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 NUS1P3-201ENST00000423502 862 ntBASIC15.29■□□□□ 0.04
ATXN3P54252 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.29■□□□□ 0.04
ATXN3P54252 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.29■□□□□ 0.04
ATXN3P54252 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.29■□□□□ 0.04
ATXN3P54252 HNRNPUP1-201ENST00000554987 333 ntBASIC15.29■□□□□ 0.04
ATXN3P54252 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ATXN3P54252 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATXN3P54252 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.29■□□□□ 0.04
ATXN3P54252 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ATXN3P54252 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.28■□□□□ 0.04
ATXN3P54252 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.28■□□□□ 0.04
ATXN3P54252 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.28■□□□□ 0.04
ATXN3P54252 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
ATXN3P54252 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 INTS4P1-203ENST00000641008 3683 ntBASIC15.28■□□□□ 0.04
ATXN3P54252 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATXN3P54252 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATXN3P54252 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.28■□□□□ 0.04
ATXN3P54252 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.28■□□□□ 0.04
ATXN3P54252 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms