Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15□□□□□ -0.01
LIMK2P53671 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15□□□□□ -0.01
LIMK2P53671 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15□□□□□ -0.01
LIMK2P53671 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15□□□□□ -0.01
LIMK2P53671 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15□□□□□ -0.01
LIMK2P53671 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15□□□□□ -0.01
LIMK2P53671 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15□□□□□ -0.01
LIMK2P53671 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15□□□□□ -0.01
LIMK2P53671 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LIMK2P53671 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15□□□□□ -0.01
LIMK2P53671 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LIMK2P53671 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15□□□□□ -0.01
LIMK2P53671 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15□□□□□ -0.01
LIMK2P53671 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
LIMK2P53671 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LIMK2P53671 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 BEND3P1-201ENST00000421591 1944 ntBASIC15□□□□□ -0.01
LIMK2P53671 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LIMK2P53671 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
LIMK2P53671 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LIMK2P53671 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK2P53671 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK2P53671 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
LIMK2P53671 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK2P53671 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 ACKR1-201ENST00000368121 1240 ntBASIC14.99□□□□□ -0.01
LIMK2P53671 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK2P53671 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LIMK2P53671 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.99□□□□□ -0.01
LIMK2P53671 AC099336.1-201ENST00000417053 1171 ntBASIC14.99□□□□□ -0.01
LIMK2P53671 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.99□□□□□ -0.01
LIMK2P53671 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK2P53671 FO681548.1-201ENST00000455617 1132 ntBASIC14.99□□□□□ -0.01
LIMK2P53671 AC007551.1-201ENST00000457394 519 ntBASIC14.99□□□□□ -0.01
LIMK2P53671 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.99□□□□□ -0.01
LIMK2P53671 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.99□□□□□ -0.01
LIMK2P53671 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.99□□□□□ -0.01
LIMK2P53671 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK2P53671 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK2P53671 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LIMK2P53671 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.99□□□□□ -0.01
LIMK2P53671 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LIMK2P53671 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.99□□□□□ -0.01
LIMK2P53671 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
LIMK2P53671 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK2P53671 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LIMK2P53671 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK2P53671 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK2P53671 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.99□□□□□ -0.01
LIMK2P53671 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LIMK2P53671 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK2P53671 CICP4-201ENST00000447359 2812 ntBASIC14.98□□□□□ -0.01
LIMK2P53671 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.98□□□□□ -0.01
LIMK2P53671 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LIMK2P53671 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK2P53671 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.98□□□□□ -0.01
LIMK2P53671 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LIMK2P53671 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.98□□□□□ -0.01
LIMK2P53671 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK2P53671 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.98□□□□□ -0.01
LIMK2P53671 AC016694.1-201ENST00000434179 700 ntBASIC14.98□□□□□ -0.01
LIMK2P53671 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LIMK2P53671 CSF2RBP1-201ENST00000447905 391 ntBASIC14.98□□□□□ -0.01
LIMK2P53671 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LIMK2P53671 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms