Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.53□□□□□ -0.24
HMGA2P52926 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.53□□□□□ -0.24
HMGA2P52926 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.53□□□□□ -0.24
HMGA2P52926 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.53□□□□□ -0.24
HMGA2P52926 AC104794.3-201ENST00000566840 1248 ntBASIC13.53□□□□□ -0.24
HMGA2P52926 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.53□□□□□ -0.24
HMGA2P52926 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.53□□□□□ -0.24
HMGA2P52926 MIR8072-201ENST00000614241 80 ntBASIC13.53□□□□□ -0.24
HMGA2P52926 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.53□□□□□ -0.24
HMGA2P52926 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HMGA2P52926 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 DGCR9-201ENST00000609630 2415 ntBASIC13.53□□□□□ -0.24
HMGA2P52926 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HMGA2P52926 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 AL590440.2-201ENST00000641973 1595 ntBASIC13.53□□□□□ -0.24
HMGA2P52926 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.53□□□□□ -0.24
HMGA2P52926 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.53□□□□□ -0.24
HMGA2P52926 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
HMGA2P52926 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGA2P52926 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGA2P52926 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HMGA2P52926 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HMGA2P52926 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.52□□□□□ -0.24
HMGA2P52926 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
HMGA2P52926 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGA2P52926 AC027612.1-201ENST00000445234 2395 ntBASIC13.52□□□□□ -0.24
HMGA2P52926 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.52□□□□□ -0.24
HMGA2P52926 AC020658.7-201ENST00000624274 2442 ntBASIC13.52□□□□□ -0.24
HMGA2P52926 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGA2P52926 CICP8-201ENST00000455800 2813 ntBASIC13.52□□□□□ -0.24
HMGA2P52926 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGA2P52926 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.52□□□□□ -0.24
HMGA2P52926 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.52□□□□□ -0.24
HMGA2P52926 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMGA2P52926 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.52□□□□□ -0.24
HMGA2P52926 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HMGA2P52926 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HMGA2P52926 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.52□□□□□ -0.25
HMGA2P52926 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.52□□□□□ -0.25
HMGA2P52926 FO681548.1-201ENST00000455617 1132 ntBASIC13.52□□□□□ -0.25
HMGA2P52926 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.52□□□□□ -0.25
HMGA2P52926 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.52□□□□□ -0.25
HMGA2P52926 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.52□□□□□ -0.25
HMGA2P52926 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HMGA2P52926 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.52□□□□□ -0.25
HMGA2P52926 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.52□□□□□ -0.25
HMGA2P52926 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.52□□□□□ -0.25
HMGA2P52926 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.52□□□□□ -0.25
HMGA2P52926 AC138696.2-201ENST00000607376 223 ntBASIC13.52□□□□□ -0.25
HMGA2P52926 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.52□□□□□ -0.25
HMGA2P52926 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.52□□□□□ -0.25
HMGA2P52926 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.52□□□□□ -0.25
HMGA2P52926 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.52□□□□□ -0.25
HMGA2P52926 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.52□□□□□ -0.25
HMGA2P52926 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 LRRC59-203ENST00000576448 1531 ntBASIC13.52□□□□□ -0.25
HMGA2P52926 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.52□□□□□ -0.25
HMGA2P52926 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HMGA2P52926 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 AC072061.1-201ENST00000569710 2234 ntBASIC13.52□□□□□ -0.25
HMGA2P52926 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HMGA2P52926 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HMGA2P52926 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
HMGA2P52926 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMGA2P52926 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
HMGA2P52926 FLJ16779-201ENST00000612722 7638 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms