Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 POM121L8P-201ENST00000417732 1281 ntBASIC15.55■□□□□ 0.08
SLC1A1P43005 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC1A1P43005 POM121L9P-203ENST00000441984 1285 ntBASIC15.55■□□□□ 0.08
SLC1A1P43005 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC1A1P43005 RN7SL48P-201ENST00000579283 293 ntBASIC15.55■□□□□ 0.08
SLC1A1P43005 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.55■□□□□ 0.08
SLC1A1P43005 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.55■□□□□ 0.08
SLC1A1P43005 AP001002.3-201ENST00000623482 206 ntBASIC15.55■□□□□ 0.08
SLC1A1P43005 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC1A1P43005 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC1A1P43005 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SLC1A1P43005 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.55■□□□□ 0.08
SLC1A1P43005 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SLC1A1P43005 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC1A1P43005 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.55■□□□□ 0.08
SLC1A1P43005 AC139712.1-201ENST00000378256 1875 ntBASIC15.54■□□□□ 0.08
SLC1A1P43005 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SLC1A1P43005 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SLC1A1P43005 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SLC1A1P43005 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC1A1P43005 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC1A1P43005 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC1A1P43005 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC1A1P43005 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 AC012617.1-204ENST00000586340 2305 ntBASIC15.54■□□□□ 0.08
SLC1A1P43005 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC1A1P43005 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC1A1P43005 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC1A1P43005 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC1A1P43005 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC1A1P43005 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC1A1P43005 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC1A1P43005 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SLC1A1P43005 AC138466.3-201ENST00000619983 221 ntBASIC15.54■□□□□ 0.08
SLC1A1P43005 ENPP7P14-201ENST00000621765 1040 ntBASIC15.54■□□□□ 0.08
SLC1A1P43005 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC1A1P43005 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC1A1P43005 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC1A1P43005 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC1A1P43005 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC1A1P43005 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC1A1P43005 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A1P43005 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SLC1A1P43005 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SLC1A1P43005 AC104581.4-201ENST00000623126 3052 ntBASIC15.53■□□□□ 0.08
SLC1A1P43005 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC1A1P43005 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC1A1P43005 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SLC1A1P43005 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A1P43005 BAATP1-201ENST00000412284 1225 ntBASIC15.53■□□□□ 0.08
SLC1A1P43005 ACTG1P3-201ENST00000431775 1114 ntBASIC15.53■□□□□ 0.08
SLC1A1P43005 AC012441.1-201ENST00000446669 685 ntBASIC15.53■□□□□ 0.08
SLC1A1P43005 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC1A1P43005 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC1A1P43005 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SLC1A1P43005 FTLP10-202ENST00000505798 471 ntBASIC15.53■□□□□ 0.08
SLC1A1P43005 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC1A1P43005 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC1A1P43005 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms