Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
KDM5CP41229 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
KDM5CP41229 ENPP7P8-202ENST00000527856 1345 ntBASIC21.55■■□□□ 1.04
KDM5CP41229 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC21.55■■□□□ 1.04
KDM5CP41229 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC21.55■■□□□ 1.04
KDM5CP41229 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
KDM5CP41229 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 AF274858.1-201ENST00000406288 372 ntBASIC21.55■■□□□ 1.04
KDM5CP41229 AC004522.1-201ENST00000419978 654 ntBASIC21.55■■□□□ 1.04
KDM5CP41229 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC21.55■■□□□ 1.04
KDM5CP41229 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC21.55■■□□□ 1.04
KDM5CP41229 HINT1-205ENST00000508488 703 ntTSL 2 BASIC21.55■■□□□ 1.04
KDM5CP41229 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC21.55■■□□□ 1.04
KDM5CP41229 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 AC140658.4-201ENST00000561990 352 ntBASIC21.55■■□□□ 1.04
KDM5CP41229 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC21.55■■□□□ 1.04
KDM5CP41229 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC21.55■■□□□ 1.04
KDM5CP41229 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.55■■□□□ 1.04
KDM5CP41229 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC21.55■■□□□ 1.04
KDM5CP41229 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
KDM5CP41229 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
KDM5CP41229 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC21.55■■□□□ 1.04
KDM5CP41229 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 ODCP-201ENST00000459650 1639 ntBASIC21.54■■□□□ 1.04
KDM5CP41229 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
KDM5CP41229 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
KDM5CP41229 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
KDM5CP41229 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC21.54■■□□□ 1.04
KDM5CP41229 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC21.54■■□□□ 1.04
KDM5CP41229 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.54■■□□□ 1.04
KDM5CP41229 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
KDM5CP41229 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC21.54■■□□□ 1.04
KDM5CP41229 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
KDM5CP41229 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC21.54■■□□□ 1.04
KDM5CP41229 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC21.54■■□□□ 1.04
KDM5CP41229 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
KDM5CP41229 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC21.54■■□□□ 1.04
KDM5CP41229 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 MECR-202ENST00000373791 2416 ntTSL 2 BASIC21.54■■□□□ 1.04
KDM5CP41229 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
KDM5CP41229 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KDM5CP41229 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
KDM5CP41229 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
KDM5CP41229 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KDM5CP41229 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
KDM5CP41229 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
KDM5CP41229 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
KDM5CP41229 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
KDM5CP41229 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC21.53■■□□□ 1.04
KDM5CP41229 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
KDM5CP41229 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC21.53■■□□□ 1.04
KDM5CP41229 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC21.53■■□□□ 1.04
KDM5CP41229 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC21.53■■□□□ 1.04
KDM5CP41229 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KDM5CP41229 AP005264.5-201ENST00000590066 467 ntBASIC21.53■■□□□ 1.04
KDM5CP41229 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KDM5CP41229 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC21.53■■□□□ 1.04
KDM5CP41229 PTPN20CP-201ENST00000614090 920 ntBASIC21.53■■□□□ 1.04
KDM5CP41229 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.53■■□□□ 1.04
KDM5CP41229 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KDM5CP41229 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KDM5CP41229 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KDM5CP41229 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC21.53■■□□□ 1.04
KDM5CP41229 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KDM5CP41229 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KDM5CP41229 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC21.53■■□□□ 1.04
KDM5CP41229 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
KDM5CP41229 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms