Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.05■□□□□ 0.48
PDE6BP35913 AC007952.4-201ENST00000573866 637 ntBASIC18.05■□□□□ 0.48
PDE6BP35913 AC007250.1-201ENST00000608934 338 ntBASIC18.05■□□□□ 0.48
PDE6BP35913 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.05■□□□□ 0.48
PDE6BP35913 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6BP35913 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6BP35913 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.05■□□□□ 0.48
PDE6BP35913 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6BP35913 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.05■□□□□ 0.48
PDE6BP35913 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDE6BP35913 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6BP35913 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6BP35913 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 TEKT4P2-202ENST00000559466 1312 ntBASIC18.04■□□□□ 0.48
PDE6BP35913 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.04■□□□□ 0.48
PDE6BP35913 AC126365.1-201ENST00000578585 1514 ntBASIC18.04■□□□□ 0.48
PDE6BP35913 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.04■□□□□ 0.48
PDE6BP35913 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.04■□□□□ 0.48
PDE6BP35913 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6BP35913 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 LINC01101-201ENST00000622953 1884 ntBASIC18.04■□□□□ 0.48
PDE6BP35913 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 STK16-203ENST00000409516 895 ntTSL 2 BASIC18.04■□□□□ 0.48
PDE6BP35913 HCG27-204ENST00000424675 895 ntTSL 3 BASIC18.04■□□□□ 0.48
PDE6BP35913 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.04■□□□□ 0.48
PDE6BP35913 RN7SL396P-201ENST00000471086 295 ntBASIC18.04■□□□□ 0.48
PDE6BP35913 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC18.04■□□□□ 0.48
PDE6BP35913 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
PDE6BP35913 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.04■□□□□ 0.48
PDE6BP35913 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6BP35913 AC002472.4-201ENST00000641915 272 ntBASIC18.04■□□□□ 0.48
PDE6BP35913 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDE6BP35913 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6BP35913 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PDE6BP35913 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6BP35913 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 AP002353.1-201ENST00000528257 1599 ntBASIC18.04■□□□□ 0.48
PDE6BP35913 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.04■□□□□ 0.48
PDE6BP35913 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDE6BP35913 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.03■□□□□ 0.48
PDE6BP35913 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.03■□□□□ 0.48
PDE6BP35913 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.03■□□□□ 0.48
PDE6BP35913 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.03■□□□□ 0.48
PDE6BP35913 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDE6BP35913 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.03■□□□□ 0.48
PDE6BP35913 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.03■□□□□ 0.48
PDE6BP35913 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 AC018638.5-201ENST00000450885 754 ntBASIC18.03■□□□□ 0.48
PDE6BP35913 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 OR5BD1P-201ENST00000532527 817 ntBASIC18.03■□□□□ 0.48
PDE6BP35913 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.03■□□□□ 0.48
PDE6BP35913 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.03■□□□□ 0.48
PDE6BP35913 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.03■□□□□ 0.48
PDE6BP35913 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDE6BP35913 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.03■□□□□ 0.48
PDE6BP35913 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDE6BP35913 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.02■□□□□ 0.48
PDE6BP35913 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms