Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PTPN6P29350 AC003102.2-201ENST00000589195 1469 ntBASIC14.12□□□□□ -0.15
PTPN6P29350 AC020910.6-201ENST00000623084 1459 ntBASIC14.12□□□□□ -0.15
PTPN6P29350 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PTPN6P29350 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 MYADML-201ENST00000474610 2147 ntBASIC14.11□□□□□ -0.15
PTPN6P29350 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.11□□□□□ -0.15
PTPN6P29350 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.11□□□□□ -0.15
PTPN6P29350 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
PTPN6P29350 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.11□□□□□ -0.15
PTPN6P29350 AC022616.1-201ENST00000518688 554 ntBASIC14.11□□□□□ -0.15
PTPN6P29350 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.11□□□□□ -0.15
PTPN6P29350 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PTPN6P29350 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.11□□□□□ -0.15
PTPN6P29350 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.11□□□□□ -0.15
PTPN6P29350 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
PTPN6P29350 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.11□□□□□ -0.15
PTPN6P29350 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.11□□□□□ -0.15
PTPN6P29350 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PTPN6P29350 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.11□□□□□ -0.15
PTPN6P29350 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.11□□□□□ -0.15
PTPN6P29350 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.11□□□□□ -0.15
PTPN6P29350 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PTPN6P29350 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTPN6P29350 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PTPN6P29350 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
PTPN6P29350 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PTPN6P29350 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.1□□□□□ -0.15
PTPN6P29350 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.1□□□□□ -0.15
PTPN6P29350 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PTPN6P29350 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PTPN6P29350 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.1□□□□□ -0.15
PTPN6P29350 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.1□□□□□ -0.15
PTPN6P29350 TTTY23B-201ENST00000442790 549 ntBASIC14.1□□□□□ -0.15
PTPN6P29350 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.1□□□□□ -0.15
PTPN6P29350 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.1□□□□□ -0.15
PTPN6P29350 AC007389.4-201ENST00000454674 793 ntBASIC14.1□□□□□ -0.15
PTPN6P29350 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.1□□□□□ -0.15
PTPN6P29350 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.1□□□□□ -0.15
PTPN6P29350 ENPP7P5-201ENST00000541031 1031 ntBASIC14.1□□□□□ -0.15
PTPN6P29350 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.1□□□□□ -0.15
PTPN6P29350 AC010319.3-201ENST00000597028 470 ntBASIC14.1□□□□□ -0.15
PTPN6P29350 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.1□□□□□ -0.15
PTPN6P29350 RPSAP52-203ENST00000622976 1023 ntBASIC14.1□□□□□ -0.15
PTPN6P29350 AL603764.1-201ENST00000636452 321 ntBASIC14.1□□□□□ -0.15
PTPN6P29350 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.1□□□□□ -0.15
PTPN6P29350 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.1□□□□□ -0.15
PTPN6P29350 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PTPN6P29350 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PTPN6P29350 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PTPN6P29350 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTPN6P29350 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms