Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC24.48■■□□□ 1.51
CFTRP13569 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CFTRP13569 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC24.48■■□□□ 1.51
CFTRP13569 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC24.48■■□□□ 1.51
CFTRP13569 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC24.48■■□□□ 1.51
CFTRP13569 RN7SL121P-201ENST00000584223 273 ntBASIC24.48■■□□□ 1.51
CFTRP13569 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC24.48■■□□□ 1.51
CFTRP13569 URAHP-205ENST00000610227 398 ntBASIC24.48■■□□□ 1.51
CFTRP13569 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC24.48■■□□□ 1.51
CFTRP13569 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC24.48■■□□□ 1.51
CFTRP13569 PRORSD1P-202ENST00000563365 2154 ntBASIC24.48■■□□□ 1.51
CFTRP13569 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CFTRP13569 SHMT1P1-201ENST00000419974 1312 ntBASIC24.48■■□□□ 1.51
CFTRP13569 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CFTRP13569 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC24.48■■□□□ 1.51
CFTRP13569 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CFTRP13569 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CFTRP13569 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CFTRP13569 SARS-202ENST00000369923 1882 ntTSL 5 BASIC24.48■■□□□ 1.51
CFTRP13569 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CFTRP13569 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC24.48■■□□□ 1.51
CFTRP13569 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CFTRP13569 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CFTRP13569 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC24.47■■□□□ 1.51
CFTRP13569 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
CFTRP13569 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CFTRP13569 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CFTRP13569 AC027612.2-202ENST00000445955 1199 ntBASIC24.47■■□□□ 1.51
CFTRP13569 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC24.47■■□□□ 1.51
CFTRP13569 BCL2L12P1-201ENST00000508390 733 ntBASIC24.47■■□□□ 1.51
CFTRP13569 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC24.47■■□□□ 1.51
CFTRP13569 DUT-207ENST00000559416 635 ntTSL 2 BASIC24.47■■□□□ 1.51
CFTRP13569 MED11-202ENST00000573708 802 ntTSL 2 BASIC24.47■■□□□ 1.51
CFTRP13569 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CFTRP13569 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC24.47■■□□□ 1.51
CFTRP13569 AC010531.8-201ENST00000623341 685 ntBASIC24.47■■□□□ 1.51
CFTRP13569 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC24.47■■□□□ 1.51
CFTRP13569 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC24.47■■□□□ 1.51
CFTRP13569 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CFTRP13569 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CFTRP13569 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CFTRP13569 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CFTRP13569 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC24.47■■□□□ 1.51
CFTRP13569 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CFTRP13569 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CFTRP13569 AC011270.2-201ENST00000624293 2550 ntBASIC24.46■■□□□ 1.51
CFTRP13569 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CFTRP13569 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CFTRP13569 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CFTRP13569 ABCD1P4-201ENST00000399687 604 ntBASIC24.46■■□□□ 1.51
CFTRP13569 AC120498.7-201ENST00000562876 330 ntBASIC24.46■■□□□ 1.51
CFTRP13569 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC24.46■■□□□ 1.51
CFTRP13569 AC139713.2-207ENST00000641556 1292 ntBASIC24.46■■□□□ 1.51
CFTRP13569 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CFTRP13569 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CFTRP13569 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CFTRP13569 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC24.46■■□□□ 1.51
CFTRP13569 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CFTRP13569 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC24.46■■□□□ 1.51
CFTRP13569 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CFTRP13569 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CFTRP13569 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CFTRP13569 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
CFTRP13569 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
CFTRP13569 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
CFTRP13569 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CFTRP13569 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CFTRP13569 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CFTRP13569 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CFTRP13569 EEF1DP5-201ENST00000431410 772 ntBASIC24.45■■□□□ 1.51
CFTRP13569 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC24.45■■□□□ 1.51
CFTRP13569 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC24.45■■□□□ 1.51
CFTRP13569 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CFTRP13569 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CFTRP13569 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC24.45■■□□□ 1.51
CFTRP13569 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CFTRP13569 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC24.45■■□□□ 1.5
CFTRP13569 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CFTRP13569 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.5
CFTRP13569 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 AL118508.1-201ENST00000613502 2345 ntBASIC24.45■■□□□ 1.5
CFTRP13569 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC24.45■■□□□ 1.5
CFTRP13569 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC24.45■■□□□ 1.5
CFTRP13569 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC24.45■■□□□ 1.5
CFTRP13569 AC079414.2-201ENST00000567157 1104 ntBASIC24.45■■□□□ 1.5
CFTRP13569 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC24.45■■□□□ 1.5
CFTRP13569 AC080013.5-201ENST00000607044 679 ntBASIC24.45■■□□□ 1.5
CFTRP13569 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CFTRP13569 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CFTRP13569 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms