Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HOXC6P09630 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HOXC6P09630 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
HOXC6P09630 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC6P09630 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC6P09630 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 MARK2P16-201ENST00000605714 1723 ntBASIC16.57■□□□□ 0.24
HOXC6P09630 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HOXC6P09630 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC6P09630 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HOXC6P09630 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HOXC6P09630 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 HIST2H2BA-201ENST00000412169 381 ntBASIC16.57■□□□□ 0.24
HOXC6P09630 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.57■□□□□ 0.24
HOXC6P09630 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.57■□□□□ 0.24
HOXC6P09630 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HOXC6P09630 AP000911.2-201ENST00000534330 502 ntBASIC16.57■□□□□ 0.24
HOXC6P09630 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXC6P09630 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.57■□□□□ 0.24
HOXC6P09630 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.57■□□□□ 0.24
HOXC6P09630 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HOXC6P09630 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.57■□□□□ 0.24
HOXC6P09630 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HOXC6P09630 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 AC126177.1-201ENST00000547829 2218 ntBASIC16.57■□□□□ 0.24
HOXC6P09630 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXC6P09630 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HOXC6P09630 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC6P09630 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HOXC6P09630 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC6P09630 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC6P09630 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXC6P09630 LINC01815-202ENST00000641468 1409 ntBASIC16.56■□□□□ 0.24
HOXC6P09630 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC6P09630 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC6P09630 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXC6P09630 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXC6P09630 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC6P09630 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.56■□□□□ 0.24
HOXC6P09630 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC6P09630 RN7SL530P-201ENST00000485097 298 ntBASIC16.56■□□□□ 0.24
HOXC6P09630 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.56■□□□□ 0.24
HOXC6P09630 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.56■□□□□ 0.24
HOXC6P09630 NUDT4P2-201ENST00000578341 546 ntBASIC16.56■□□□□ 0.24
HOXC6P09630 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXC6P09630 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HOXC6P09630 AC127024.7-201ENST00000625101 200 ntBASIC16.56■□□□□ 0.24
HOXC6P09630 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXC6P09630 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC6P09630 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXC6P09630 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HOXC6P09630 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXC6P09630 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HOXC6P09630 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.56■□□□□ 0.24
HOXC6P09630 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HOXC6P09630 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HOXC6P09630 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HOXC6P09630 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HOXC6P09630 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.55■□□□□ 0.24
HOXC6P09630 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HOXC6P09630 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HOXC6P09630 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.55■□□□□ 0.24
HOXC6P09630 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXC6P09630 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HOXC6P09630 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HOXC6P09630 HLA-DMA-203ENST00000395305 777 ntBASIC16.55■□□□□ 0.24
HOXC6P09630 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HOXC6P09630 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXC6P09630 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXC6P09630 AC092638.2-201ENST00000441105 947 ntBASIC16.55■□□□□ 0.24
HOXC6P09630 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXC6P09630 AL157792.1-201ENST00000488281 530 ntBASIC16.55■□□□□ 0.24
HOXC6P09630 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 261.6 ms