Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.02□□□□□ -0.33
SFTPBP07988 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SFTPBP07988 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SFTPBP07988 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SFTPBP07988 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SFTPBP07988 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SFTPBP07988 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.01□□□□□ -0.33
SFTPBP07988 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.01□□□□□ -0.33
SFTPBP07988 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.01□□□□□ -0.33
SFTPBP07988 CHCHD2P3-201ENST00000603038 451 ntBASIC13.01□□□□□ -0.33
SFTPBP07988 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 AC007787.1-201ENST00000588095 1583 ntBASIC13.01□□□□□ -0.33
SFTPBP07988 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SFTPBP07988 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SFTPBP07988 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SFTPBP07988 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13□□□□□ -0.33
SFTPBP07988 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
SFTPBP07988 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SFTPBP07988 SLC7A15P-201ENST00000424028 1363 ntBASIC13□□□□□ -0.33
SFTPBP07988 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms