Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM2P07951 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.01■□□□□ 0.31
TPM2P07951 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TPM2P07951 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM2P07951 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM2P07951 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM2P07951 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TPM2P07951 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM2P07951 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TPM2P07951 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
TPM2P07951 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TPM2P07951 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM2P07951 TNN-202ENST00000621086 4234 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM2P07951 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 PCDHGB8P-201ENST00000502926 1973 ntBASIC17■□□□□ 0.31
TPM2P07951 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TPM2P07951 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC17■□□□□ 0.31
TPM2P07951 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 TSN-212ENST00000536142 3328 ntTSL 2 BASIC17■□□□□ 0.31
TPM2P07951 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC17■□□□□ 0.31
TPM2P07951 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TPM2P07951 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TPM2P07951 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17■□□□□ 0.31
TPM2P07951 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17■□□□□ 0.31
TPM2P07951 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17■□□□□ 0.31
TPM2P07951 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TPM2P07951 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17■□□□□ 0.31
TPM2P07951 AP001059.3-201ENST00000619053 235 ntBASIC17■□□□□ 0.31
TPM2P07951 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17■□□□□ 0.31
TPM2P07951 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
TPM2P07951 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17■□□□□ 0.31
TPM2P07951 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TPM2P07951 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
TPM2P07951 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TPM2P07951 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TPM2P07951 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC17■□□□□ 0.31
TPM2P07951 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC17■□□□□ 0.31
TPM2P07951 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPM2P07951 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TPM2P07951 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM2P07951 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 AC012508.2-201ENST00000567613 1472 ntBASIC16.99■□□□□ 0.31
TPM2P07951 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TPM2P07951 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM2P07951 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TPM2P07951 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM2P07951 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TPM2P07951 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.99■□□□□ 0.31
TPM2P07951 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.99■□□□□ 0.31
TPM2P07951 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.99■□□□□ 0.31
TPM2P07951 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.99■□□□□ 0.31
TPM2P07951 AL033527.5-202ENST00000641632 1098 ntBASIC16.99■□□□□ 0.31
TPM2P07951 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TPM2P07951 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TPM2P07951 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 Z97205.2-201ENST00000564697 1639 ntBASIC16.99■□□□□ 0.31
TPM2P07951 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPM2P07951 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms