Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LDLRP01130 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LDLRP01130 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LDLRP01130 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.46□□□□□ -0.09
LDLRP01130 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.46□□□□□ -0.09
LDLRP01130 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.46□□□□□ -0.09
LDLRP01130 AL589987.1-201ENST00000453380 819 ntBASIC14.46□□□□□ -0.09
LDLRP01130 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.46□□□□□ -0.09
LDLRP01130 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.46□□□□□ -0.09
LDLRP01130 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.46□□□□□ -0.09
LDLRP01130 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.46□□□□□ -0.09
LDLRP01130 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.46□□□□□ -0.09
LDLRP01130 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.46□□□□□ -0.09
LDLRP01130 BTNL10-201ENST00000595971 695 ntBASIC14.46□□□□□ -0.09
LDLRP01130 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LDLRP01130 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.46□□□□□ -0.09
LDLRP01130 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LDLRP01130 AL033527.5-201ENST00000641382 801 ntBASIC14.46□□□□□ -0.09
LDLRP01130 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.46□□□□□ -0.09
LDLRP01130 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LDLRP01130 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LDLRP01130 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
LDLRP01130 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.46□□□□□ -0.09
LDLRP01130 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LDLRP01130 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LDLRP01130 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LDLRP01130 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
LDLRP01130 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LDLRP01130 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.46□□□□□ -0.1
LDLRP01130 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.46□□□□□ -0.1
LDLRP01130 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LDLRP01130 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LDLRP01130 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
LDLRP01130 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LDLRP01130 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LDLRP01130 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LDLRP01130 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.45□□□□□ -0.1
LDLRP01130 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.45□□□□□ -0.1
LDLRP01130 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.45□□□□□ -0.1
LDLRP01130 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.45□□□□□ -0.1
LDLRP01130 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.45□□□□□ -0.1
LDLRP01130 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 RRP7BP-205ENST00000566851 833 ntBASIC14.45□□□□□ -0.1
LDLRP01130 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.45□□□□□ -0.1
LDLRP01130 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.45□□□□□ -0.1
LDLRP01130 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LDLRP01130 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.45□□□□□ -0.1
LDLRP01130 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.45□□□□□ -0.1
LDLRP01130 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 KRT8P12-202ENST00000472924 1397 ntBASIC14.45□□□□□ -0.1
LDLRP01130 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.45□□□□□ -0.1
LDLRP01130 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LDLRP01130 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
LDLRP01130 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LDLRP01130 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LDLRP01130 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms