Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PDGFBP01127 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PDGFBP01127 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.66□□□□□ -0.06
PDGFBP01127 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 AC084018.2-201ENST00000613093 2607 ntBASIC14.66□□□□□ -0.06
PDGFBP01127 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PDGFBP01127 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.66□□□□□ -0.06
PDGFBP01127 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.66□□□□□ -0.06
PDGFBP01127 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFBP01127 BPIFB5P-201ENST00000457066 1099 ntBASIC14.66□□□□□ -0.06
PDGFBP01127 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.66□□□□□ -0.06
PDGFBP01127 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC14.66□□□□□ -0.06
PDGFBP01127 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFBP01127 AC092862.1-201ENST00000541534 533 ntBASIC14.66□□□□□ -0.06
PDGFBP01127 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFBP01127 AC068831.5-201ENST00000557387 328 ntBASIC14.66□□□□□ -0.06
PDGFBP01127 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
PDGFBP01127 AL590235.1-201ENST00000564650 861 ntBASIC14.66□□□□□ -0.06
PDGFBP01127 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFBP01127 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFBP01127 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFBP01127 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.66□□□□□ -0.06
PDGFBP01127 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.66□□□□□ -0.06
PDGFBP01127 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.66□□□□□ -0.06
PDGFBP01127 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.66□□□□□ -0.06
PDGFBP01127 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PDGFBP01127 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.66□□□□□ -0.06
PDGFBP01127 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 AC024909.3-201ENST00000611513 2257 ntBASIC14.66□□□□□ -0.06
PDGFBP01127 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.66□□□□□ -0.06
PDGFBP01127 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PDGFBP01127 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PDGFBP01127 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PDGFBP01127 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PDGFBP01127 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PDGFBP01127 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFBP01127 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFBP01127 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 KRT8P28-201ENST00000433288 1390 ntBASIC14.65□□□□□ -0.06
PDGFBP01127 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 WASH3P-207ENST00000560956 1394 ntBASIC14.65□□□□□ -0.06
PDGFBP01127 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PDGFBP01127 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 NME6-208ENST00000435684 599 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFBP01127 RPL3P5-201ENST00000441645 1232 ntBASIC14.65□□□□□ -0.06
PDGFBP01127 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.65□□□□□ -0.06
PDGFBP01127 AC023906.1-201ENST00000486386 453 ntBASIC14.65□□□□□ -0.06
PDGFBP01127 RN7SL288P-201ENST00000490496 291 ntBASIC14.65□□□□□ -0.06
PDGFBP01127 RN7SL564P-201ENST00000496309 250 ntBASIC14.65□□□□□ -0.06
PDGFBP01127 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PDGFBP01127 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.65□□□□□ -0.06
PDGFBP01127 AC124068.2-201ENST00000569473 1109 ntBASIC14.65□□□□□ -0.06
PDGFBP01127 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFBP01127 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFBP01127 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFBP01127 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
PDGFBP01127 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFBP01127 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PDGFBP01127 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
PDGFBP01127 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PDGFBP01127 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.65□□□□□ -0.06
PDGFBP01127 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.64□□□□□ -0.07
PDGFBP01127 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms