Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NKX2-2O95096 AL035252.4-201ENST00000624174 288 ntBASIC13.67□□□□□ -0.22
NKX2-2O95096 AC008687.7-202ENST00000637404 953 ntBASIC13.67□□□□□ -0.22
NKX2-2O95096 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-2O95096 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-2O95096 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-2O95096 RN7SL832P-201ENST00000607781 1756 ntBASIC13.67□□□□□ -0.22
NKX2-2O95096 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-2O95096 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-2O95096 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NKX2-2O95096 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-2O95096 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
NKX2-2O95096 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX2-2O95096 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX2-2O95096 KRT8P4-201ENST00000509735 1454 ntBASIC13.67□□□□□ -0.22
NKX2-2O95096 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.66□□□□□ -0.22
NKX2-2O95096 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 SNX18-202ENST00000343017 3140 ntBASIC13.66□□□□□ -0.22
NKX2-2O95096 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-2O95096 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
NKX2-2O95096 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-2O95096 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NKX2-2O95096 AC026954.1-201ENST00000429771 1293 ntBASIC13.66□□□□□ -0.22
NKX2-2O95096 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
NKX2-2O95096 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-2O95096 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-2O95096 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-2O95096 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-2O95096 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-2O95096 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-2O95096 AC023310.1-201ENST00000554836 735 ntBASIC13.66□□□□□ -0.22
NKX2-2O95096 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX2-2O95096 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX2-2O95096 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX2-2O95096 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NKX2-2O95096 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-2O95096 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-2O95096 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-2O95096 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.65□□□□□ -0.22
NKX2-2O95096 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX2-2O95096 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX2-2O95096 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
NKX2-2O95096 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 AC027601.5-201ENST00000624065 2482 ntBASIC13.65□□□□□ -0.22
NKX2-2O95096 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-2O95096 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-2O95096 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX2-2O95096 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX2-2O95096 AC010141.1-201ENST00000411585 623 ntBASIC13.65□□□□□ -0.22
NKX2-2O95096 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.65□□□□□ -0.22
NKX2-2O95096 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.65□□□□□ -0.22
NKX2-2O95096 AL035414.1-201ENST00000451327 857 ntBASIC13.65□□□□□ -0.22
NKX2-2O95096 HOMER2P2-201ENST00000451621 847 ntBASIC13.65□□□□□ -0.22
NKX2-2O95096 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms