Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC012617.1-204ENST00000586340 2305 ntBASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PAN3-AS1-201ENST00000563843 1351 ntBASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AP002414.4-201ENST00000589764 1148 ntBASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TNRC18P1-201ENST00000502875 3650 ntBASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 DDC-213ENST00000617822 1809 ntTSL 3 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 EML1-203ENST00000334192 4064 ntTSL 5 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MKRN5P-201ENST00000445263 1467 ntBASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AC073508.3-201ENST00000619697 1419 ntBASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
TMEM256-PLSCR3K7ERE1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms