Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00473A8K010 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00473A8K010 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00473A8K010 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.11□□□□□ -0.47
LINC00473A8K010 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.11□□□□□ -0.47
LINC00473A8K010 ELK1P1-201ENST00000485699 580 ntBASIC12.11□□□□□ -0.47
LINC00473A8K010 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00473A8K010 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC00473A8K010 AC131206.1-201ENST00000538078 1211 ntBASIC12.11□□□□□ -0.47
LINC00473A8K010 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.11□□□□□ -0.47
LINC00473A8K010 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00473A8K010 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.11□□□□□ -0.47
LINC00473A8K010 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LINC00473A8K010 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00473A8K010 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00473A8K010 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00473A8K010 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00473A8K010 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00473A8K010 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC00473A8K010 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00473A8K010 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
LINC00473A8K010 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00473A8K010 AL138725.1-201ENST00000407347 1314 ntBASIC12.11□□□□□ -0.47
LINC00473A8K010 KRT8P35-201ENST00000483942 1338 ntBASIC12.11□□□□□ -0.47
LINC00473A8K010 MRPL37P1-201ENST00000592451 1337 ntBASIC12.11□□□□□ -0.47
LINC00473A8K010 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LINC00473A8K010 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
LINC00473A8K010 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00473A8K010 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00473A8K010 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00473A8K010 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC00473A8K010 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00473A8K010 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 ACKR1-201ENST00000368121 1240 ntBASIC12.1□□□□□ -0.47
LINC00473A8K010 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
LINC00473A8K010 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.1□□□□□ -0.47
LINC00473A8K010 AC087499.6-201ENST00000411576 835 ntBASIC12.1□□□□□ -0.47
LINC00473A8K010 KRT18P25-201ENST00000508931 1278 ntBASIC12.1□□□□□ -0.47
LINC00473A8K010 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 ENPP7P5-201ENST00000541031 1031 ntBASIC12.1□□□□□ -0.47
LINC00473A8K010 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00473A8K010 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00473A8K010 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC00473A8K010 CTBP2P3-201ENST00000585629 1255 ntBASIC12.1□□□□□ -0.47
LINC00473A8K010 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00473A8K010 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 AC004233.3-201ENST00000607794 1269 ntBASIC12.1□□□□□ -0.47
LINC00473A8K010 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC00473A8K010 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00473A8K010 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 AC015688.4-201ENST00000580780 1647 ntBASIC12.1□□□□□ -0.47
LINC00473A8K010 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00473A8K010 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00473A8K010 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00473A8K010 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00473A8K010 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms