Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AC007967.4-201ENST00000614700 386 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AL773604.1-201ENST00000617417 272 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AC091812.2-201ENST00000619081 385 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AP001002.3-201ENST00000623482 206 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AC066615.1-201ENST00000640911 628 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 PRSS30P-206ENST00000641773 873 ntBASIC10.45□□□□□ -0.74
LINC01546A6NGU7 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
LINC01546A6NGU7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AL445250.1-201ENST00000641671 2259 ntBASIC10.44□□□□□ -0.74
LINC01546A6NGU7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AL031284.1-201ENST00000419297 478 ntBASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 SERBP1P3-201ENST00000459980 809 ntBASIC10.44□□□□□ -0.74
LINC01546A6NGU7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AL079307.3-201ENST00000556114 283 ntBASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AL513190.1-201ENST00000621254 727 ntBASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AC105339.1-204ENST00000636249 355 ntBASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AL603764.1-201ENST00000636452 321 ntBASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AL033527.5-202ENST00000641632 1098 ntBASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AC092902.6-201ENST00000641783 218 ntBASIC10.44□□□□□ -0.74
LINC01546A6NGU7 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01546A6NGU7 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms