Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LINC00628-201ENST00000628516 1289 ntBASIC16.22■□□□□ 0.19
CCDC66A2RUB6 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.22■□□□□ 0.19
CCDC66A2RUB6 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC66A2RUB6 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 AC106818.1-201ENST00000623223 3242 ntBASIC16.21■□□□□ 0.19
CCDC66A2RUB6 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 RPL13P2-201ENST00000440687 659 ntBASIC16.21■□□□□ 0.19
CCDC66A2RUB6 AC004967.1-201ENST00000453589 447 ntBASIC16.21■□□□□ 0.19
CCDC66A2RUB6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 AC025181.2-201ENST00000606994 802 ntBASIC16.21■□□□□ 0.19
CCDC66A2RUB6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC66A2RUB6 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
CCDC66A2RUB6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 REXO1L4P-201ENST00000605109 1937 ntBASIC16.2■□□□□ 0.18
CCDC66A2RUB6 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms