Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC099336.1-201ENST00000417053 1171 ntBASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.01□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 YBX1P6-201ENST00000442962 1002 ntBASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AP000812.2-201ENST00000538934 718 ntBASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC244669.2-201ENST00000612320 853 ntBASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RHOXF1P1-202ENST00000635473 501 ntBASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KRT8P35-201ENST00000483942 1338 ntBASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TCRBV4S1A1TA0A5B7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TCRBV4S1A1TA0A5B7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms