Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 AC007541.1-201ENST00000570282 1469 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 AL442647.2-201ENST00000429864 857 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 UGT1A2P-201ENST00000454886 866 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 SERBP1P5-201ENST00000510079 1181 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 AC027796.2-201ENST00000575326 344 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 AC133539.2-201ENST00000604757 467 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 AC008761.3-201ENST00000624803 892 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 AC023908.3-201ENST00000564211 3047 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 AL805961.2-201ENST00000642139 4817 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 AC117489.1-201ENST00000625169 3217 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 PTPRVP-205ENST00000641549 5067 ntBASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
POLR1DQ9Y2S0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 AL391825.1-201ENST00000457671 1364 ntBASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 AC018665.1-201ENST00000622927 1362 ntBASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 LRRC59-203ENST00000576448 1531 ntBASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 HLA-K-203ENST00000430151 1046 ntBASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 TSPY16P-201ENST00000449843 468 ntBASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 SPDYE22P-201ENST00000582158 798 ntBASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
POLR1DQ9Y2S0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms