Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 REXO1L5P-201ENST00000622260 2098 ntBASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 AC092127.1-201ENST00000567093 3455 ntBASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 DPM3-202ENST00000368399 517 ntBASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 AC026434.2-201ENST00000506094 1078 ntBASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 AC245884.6-201ENST00000515672 1067 ntBASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 BNIP3P13-201ENST00000599968 566 ntBASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 AC002472.3-201ENST00000640124 621 ntBASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 AC012508.2-201ENST00000567613 1472 ntBASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SSX2IPQ9Y2D8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 MAGEA5-201ENST00000446757 942 ntBASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AC079328.1-201ENST00000560358 952 ntBASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AC013355.1-201ENST00000562625 723 ntBASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AL136301.1-201ENST00000615830 422 ntBASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AP001505.2-201ENST00000616815 443 ntBASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AC022748.3-201ENST00000621828 275 ntBASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AC004923.1-202ENST00000642106 209 ntBASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16■□□□□ 0.15
SSX2IPQ9Y2D8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SSX2IPQ9Y2D8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms