Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 EEF1DP6-201ENST00000449232 372 ntBASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 TMEM198B-204ENST00000484016 896 ntBASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 AC093752.3-201ENST00000567343 901 ntBASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 NFIC-211ENST00000641145 8399 ntBASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SYNPO2Q9UMS6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 AP002353.1-201ENST00000528257 1599 ntBASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 FTLP1-201ENST00000449155 526 ntBASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 RN7SL530P-201ENST00000485097 298 ntBASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 RN7SL67P-201ENST00000492147 296 ntBASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 AC114947.1-202ENST00000514136 344 ntBASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 PRKXP1-201ENST00000561423 1122 ntBASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 AL109837.1-201ENST00000603272 613 ntBASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 AC051619.9-201ENST00000623237 597 ntBASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 AL353726.2-201ENST00000623259 884 ntBASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SYNPO2Q9UMS6 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms