Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.65□□□□□ -0.38
CLN8Q9UBY8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
CLN8Q9UBY8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.65□□□□□ -0.39
CLN8Q9UBY8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
CLN8Q9UBY8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CLN8Q9UBY8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLN8Q9UBY8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.65□□□□□ -0.39
CLN8Q9UBY8 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CLN8Q9UBY8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 AC138969.2-201ENST00000532739 9932 ntBASIC12.64□□□□□ -0.39
CLN8Q9UBY8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 TPM3P8-201ENST00000330554 643 ntBASIC12.64□□□□□ -0.39
CLN8Q9UBY8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 AP000812.2-201ENST00000538934 718 ntBASIC12.64□□□□□ -0.39
CLN8Q9UBY8 KRT90P-201ENST00000549264 1064 ntBASIC12.64□□□□□ -0.39
CLN8Q9UBY8 GNRHR2-203ENST00000581100 1187 ntBASIC12.64□□□□□ -0.39
CLN8Q9UBY8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 AC244669.2-201ENST00000612320 853 ntBASIC12.64□□□□□ -0.39
CLN8Q9UBY8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 RHOXF1P1-202ENST00000635473 501 ntBASIC12.64□□□□□ -0.39
CLN8Q9UBY8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLN8Q9UBY8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 AL360270.3-201ENST00000609118 1348 ntBASIC12.63□□□□□ -0.39
CLN8Q9UBY8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLN8Q9UBY8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms