Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.1■□□□□ 0.01
HACD3Q9P035 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.1■□□□□ 0.01
HACD3Q9P035 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 AC138969.2-201ENST00000532739 9932 ntBASIC15.1■□□□□ 0.01
HACD3Q9P035 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HACD3Q9P035 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
HACD3Q9P035 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.1■□□□□ 0.01
HACD3Q9P035 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HACD3Q9P035 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 TPM3P8-201ENST00000330554 643 ntBASIC15.09■□□□□ 0.01
HACD3Q9P035 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.09■□□□□ 0.01
HACD3Q9P035 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 BCRP2-202ENST00000447763 634 ntBASIC15.09■□□□□ 0.01
HACD3Q9P035 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.09■□□□□ 0.01
HACD3Q9P035 FO681548.1-201ENST00000455617 1132 ntBASIC15.09■□□□□ 0.01
HACD3Q9P035 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 BCRP6-201ENST00000510112 632 ntBASIC15.09■□□□□ 0.01
HACD3Q9P035 BCRP7-201ENST00000511549 544 ntBASIC15.09■□□□□ 0.01
HACD3Q9P035 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.09■□□□□ 0.01
HACD3Q9P035 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.09■□□□□ 0.01
HACD3Q9P035 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 GNRHR2-203ENST00000581100 1187 ntBASIC15.09■□□□□ 0.01
HACD3Q9P035 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.09■□□□□ 0.01
HACD3Q9P035 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
HACD3Q9P035 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
HACD3Q9P035 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HACD3Q9P035 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HACD3Q9P035 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
HACD3Q9P035 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.08■□□□□ 0.01
HACD3Q9P035 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
HACD3Q9P035 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HACD3Q9P035 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.08■□□□□ 0.01
HACD3Q9P035 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.08■□□□□ 0.01
HACD3Q9P035 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
HACD3Q9P035 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.08■□□□□ 0.01
HACD3Q9P035 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HACD3Q9P035 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
HACD3Q9P035 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.08■□□□□ 0
HACD3Q9P035 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.08■□□□□ 0
HACD3Q9P035 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.08■□□□□ 0
HACD3Q9P035 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.08■□□□□ 0
HACD3Q9P035 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HACD3Q9P035 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.08■□□□□ 0
HACD3Q9P035 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.08■□□□□ 0
HACD3Q9P035 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HACD3Q9P035 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.08■□□□□ 0
HACD3Q9P035 POM121L8P-201ENST00000417732 1281 ntBASIC15.08■□□□□ 0
HACD3Q9P035 TMEM14DP-201ENST00000422205 345 ntBASIC15.08■□□□□ 0
HACD3Q9P035 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.08■□□□□ 0
HACD3Q9P035 AC016694.1-201ENST00000434179 700 ntBASIC15.08■□□□□ 0
HACD3Q9P035 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
HACD3Q9P035 POM121L9P-203ENST00000441984 1285 ntBASIC15.08■□□□□ 0
HACD3Q9P035 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
HACD3Q9P035 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
HACD3Q9P035 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.08■□□□□ 0
HACD3Q9P035 MESTP3-201ENST00000503460 968 ntBASIC15.08■□□□□ 0
HACD3Q9P035 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms