Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.34■□□□□ 0.21
UBE2OQ9C0C9 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.33■□□□□ 0.21
UBE2OQ9C0C9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBE2OQ9C0C9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBE2OQ9C0C9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBE2OQ9C0C9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.33■□□□□ 0.21
UBE2OQ9C0C9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBE2OQ9C0C9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBE2OQ9C0C9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 KLF2P1-201ENST00000447438 1042 ntBASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 AP005117.1-202ENST00000581724 1908 ntBASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBE2OQ9C0C9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 TMCO5B-205ENST00000530020 894 ntBASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 AC126177.1-201ENST00000547829 2218 ntBASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 MIR3180-2-201ENST00000581748 88 ntBASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 AC005962.1-201ENST00000584100 773 ntBASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 AC009884.2-201ENST00000603110 324 ntBASIC16.32■□□□□ 0.2
UBE2OQ9C0C9 MEG3_2.1-201ENST00000611456 105 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms