Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 SPDYE19P-201ENST00000338590 713 ntBASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 INGX-202ENST00000489074 768 ntBASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 RARRES2P5-201ENST00000564013 466 ntBASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 AC036164.1-201ENST00000570544 333 ntBASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 AC010327.5-201ENST00000586923 3061 ntBASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 UGT1A2P-201ENST00000454886 866 ntBASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 FAM86LP-201ENST00000478302 853 ntBASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 RNA5SP421-201ENST00000516864 134 ntBASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 SAMD11P1-201ENST00000571429 661 ntBASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.9□□□□□ -0.5
CHRDL1Q9BU40 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms