Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.65□□□□□ -0.38
CLCC1Q96S66 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.65□□□□□ -0.38
CLCC1Q96S66 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.65□□□□□ -0.38
CLCC1Q96S66 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLCC1Q96S66 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CLCC1Q96S66 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.65□□□□□ -0.38
CLCC1Q96S66 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.65□□□□□ -0.38
CLCC1Q96S66 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLCC1Q96S66 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLCC1Q96S66 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLCC1Q96S66 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CLCC1Q96S66 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLCC1Q96S66 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLCC1Q96S66 AC092135.3-201ENST00000624151 1846 ntBASIC12.65□□□□□ -0.39
CLCC1Q96S66 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 AL607033.1-201ENST00000623900 1599 ntBASIC12.64□□□□□ -0.39
CLCC1Q96S66 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.64□□□□□ -0.39
CLCC1Q96S66 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 FAM86GP-201ENST00000448322 971 ntBASIC12.64□□□□□ -0.39
CLCC1Q96S66 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 IGHV3-42-201ENST00000520410 361 ntBASIC12.64□□□□□ -0.39
CLCC1Q96S66 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLCC1Q96S66 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLCC1Q96S66 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLCC1Q96S66 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLCC1Q96S66 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLCC1Q96S66 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLCC1Q96S66 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLCC1Q96S66 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLCC1Q96S66 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLCC1Q96S66 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLCC1Q96S66 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLCC1Q96S66 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms