Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
GAFA1Q96PS6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 FAM21FP-201ENST00000426241 1131 ntBASIC12.33□□□□□ -0.44
GAFA1Q96PS6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 AC103988.2-201ENST00000561804 725 ntBASIC12.33□□□□□ -0.44
GAFA1Q96PS6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 OR2I1P-210ENST00000642037 4691 ntBASIC12.33□□□□□ -0.44
GAFA1Q96PS6 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 AL590440.2-201ENST00000641973 1595 ntBASIC12.33□□□□□ -0.44
GAFA1Q96PS6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 AL023775.1-201ENST00000454907 1746 ntBASIC12.33□□□□□ -0.44
GAFA1Q96PS6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
GAFA1Q96PS6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 AC005912.2-201ENST00000619492 2400 ntBASIC12.32□□□□□ -0.44
GAFA1Q96PS6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 AC139712.1-201ENST00000378256 1875 ntBASIC12.32□□□□□ -0.44
GAFA1Q96PS6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.32□□□□□ -0.44
GAFA1Q96PS6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms