Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 AC091271.1-201ENST00000611877 1162 ntBASIC15.32■□□□□ 0.04
RPRD1AQ96P16 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.32■□□□□ 0.04
RPRD1AQ96P16 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 LINC02228-204ENST00000642115 2962 ntBASIC15.31■□□□□ 0.04
RPRD1AQ96P16 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 AC007686.3-201ENST00000619017 3487 ntBASIC15.31■□□□□ 0.04
RPRD1AQ96P16 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 ACTBP11-201ENST00000436287 1126 ntBASIC15.31■□□□□ 0.04
RPRD1AQ96P16 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 AC092658.1-201ENST00000505836 891 ntBASIC15.31■□□□□ 0.04
RPRD1AQ96P16 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 AC092135.3-201ENST00000624151 1846 ntBASIC15.31■□□□□ 0.04
RPRD1AQ96P16 INTS4P1-203ENST00000641008 3683 ntBASIC15.31■□□□□ 0.04
RPRD1AQ96P16 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RPRD1AQ96P16 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 FAM86MP-201ENST00000340703 885 ntBASIC15.3■□□□□ 0.04
RPRD1AQ96P16 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 ALG3P1-201ENST00000508806 1114 ntBASIC15.3■□□□□ 0.04
RPRD1AQ96P16 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms