Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 MEIS3P1-201ENST00000495167 958 ntBASIC14.36□□□□□ -0.11
VPS33AQ96AX1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AL391069.4-201ENST00000609583 481 ntBASIC14.36□□□□□ -0.11
VPS33AQ96AX1 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 AL138799.1-201ENST00000448213 1675 ntBASIC14.36□□□□□ -0.11
VPS33AQ96AX1 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VPS33AQ96AX1 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 AC100757.3-201ENST00000622361 1406 ntBASIC14.35□□□□□ -0.11
VPS33AQ96AX1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 AC107890.1-201ENST00000422478 521 ntBASIC14.35□□□□□ -0.11
VPS33AQ96AX1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 AC107373.2-201ENST00000607735 490 ntBASIC14.35□□□□□ -0.11
VPS33AQ96AX1 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 CICP16-201ENST00000502609 2813 ntBASIC14.35□□□□□ -0.11
VPS33AQ96AX1 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VPS33AQ96AX1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms