Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 PIN1P1-201ENST00000412108 996 ntBASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 AC123567.1-201ENST00000548294 1261 ntBASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 MIR8072-201ENST00000614241 80 ntBASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CFAP61Q8NHU2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 DGCR9-201ENST00000609630 2415 ntBASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AC087499.6-201ENST00000411576 835 ntBASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AL353779.1-201ENST00000434793 351 ntBASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AC190387.1-201ENST00000551683 408 ntBASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AC138761.1-201ENST00000584393 385 ntBASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AL391069.4-201ENST00000609583 481 ntBASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AC007431.3-201ENST00000623221 587 ntBASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AC113367.3-201ENST00000508316 1912 ntBASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CFAP61Q8NHU2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 RPL5P21-201ENST00000404620 815 ntBASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.16■□□□□ 0.02
CFAP61Q8NHU2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms