Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 AC130709.1-201ENST00000484779 1212 ntBASIC15.06■□□□□ 0
SYNPOQ8N3V7 AC008723.1-201ENST00000506922 207 ntBASIC15.06■□□□□ 0
SYNPOQ8N3V7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 AC027601.3-201ENST00000622907 509 ntBASIC15.06■□□□□ 0
SYNPOQ8N3V7 AL805961.1-201ENST00000642026 753 ntBASIC15.06■□□□□ 0
SYNPOQ8N3V7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.06■□□□□ 0
SYNPOQ8N3V7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SYNPOQ8N3V7 REXO1L4P-201ENST00000605109 1937 ntBASIC15.05■□□□□ 0
SYNPOQ8N3V7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.05■□□□□ 0
SYNPOQ8N3V7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.05■□□□□ 0
SYNPOQ8N3V7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ 0
SYNPOQ8N3V7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.05■□□□□ 0
SYNPOQ8N3V7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.05■□□□□ 0
SYNPOQ8N3V7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SYNPOQ8N3V7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SYNPOQ8N3V7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SYNPOQ8N3V7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
SYNPOQ8N3V7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 AL592076.1-201ENST00000424448 303 ntBASIC15.05■□□□□ -0
SYNPOQ8N3V7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 RPL7P35-201ENST00000446943 740 ntBASIC15.05■□□□□ -0
SYNPOQ8N3V7 RN7SL8P-201ENST00000461771 266 ntBASIC15.05■□□□□ -0
SYNPOQ8N3V7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 AC026803.1-201ENST00000569130 274 ntBASIC15.05■□□□□ -0
SYNPOQ8N3V7 AC005962.1-201ENST00000584100 773 ntBASIC15.05■□□□□ -0
SYNPOQ8N3V7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SYNPOQ8N3V7 AC068587.6-202ENST00000641839 5619 ntBASIC15.05■□□□□ -0
SYNPOQ8N3V7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SYNPOQ8N3V7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.04■□□□□ -0
SYNPOQ8N3V7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SYNPOQ8N3V7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms