Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LYSMD2Q8IV50 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 AL031595.1-201ENST00000623969 4709 ntBASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 AC131212.3-201ENST00000624087 4219 ntBASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 AGAP12P-201ENST00000585227 2359 ntBASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 RARRES2P8-201ENST00000566335 367 ntBASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 AC018845.2-201ENST00000568326 409 ntBASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 AL031008.1-201ENST00000619963 541 ntBASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.07□□□□□ -0.32
LYSMD2Q8IV50 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 AC110048.1-201ENST00000604293 2157 ntBASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 AL031284.1-201ENST00000419297 478 ntBASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.06□□□□□ -0.32
LYSMD2Q8IV50 AC074386.1-202ENST00000463561 864 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms