Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 TSSK5P-201ENST00000423978 907 ntBASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AC134407.3-201ENST00000624035 2139 ntBASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AC009477.1-201ENST00000452936 217 ntBASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AC004890.2-204ENST00000481968 304 ntBASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AL390955.2-201ENST00000603032 514 ntBASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
TMEM53Q6P2H8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 C18orf15-201ENST00000623680 2534 ntBASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.75□□□□□ -0.21
TMEM53Q6P2H8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms