Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.02■□□□□ 0.16
CBWD3Q5JTY5 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.02■□□□□ 0.16
CBWD3Q5JTY5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.02■□□□□ 0.16
CBWD3Q5JTY5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CBWD3Q5JTY5 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.02■□□□□ 0.16
CBWD3Q5JTY5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.02■□□□□ 0.16
CBWD3Q5JTY5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CBWD3Q5JTY5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
CBWD3Q5JTY5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CBWD3Q5JTY5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 KHSRPP1-201ENST00000427983 1768 ntBASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 MIR1202-201ENST00000408529 83 ntBASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 AC112492.5-201ENST00000421897 457 ntBASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 PUDPP3-201ENST00000445368 636 ntBASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 C2orf69P2-201ENST00000562032 1123 ntBASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 RN7SL713P-201ENST00000582127 302 ntBASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 AC002472.3-201ENST00000640124 621 ntBASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 AC011498.7-201ENST00000624986 2027 ntBASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.01■□□□□ 0.15
CBWD3Q5JTY5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 RN7SL832P-201ENST00000607781 1756 ntBASIC16■□□□□ 0.15
CBWD3Q5JTY5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16■□□□□ 0.15
CBWD3Q5JTY5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16■□□□□ 0.15
CBWD3Q5JTY5 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16■□□□□ 0.15
CBWD3Q5JTY5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CBWD3Q5JTY5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBWD3Q5JTY5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CBWD3Q5JTY5 F10-203ENST00000409306 1450 ntTSL 3 BASIC16■□□□□ 0.15
CBWD3Q5JTY5 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms