Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHROOM1Q2M3G4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 LDHBP1-201ENST00000455730 1119 ntBASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 NDUFS6P1-201ENST00000485187 316 ntBASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 AC103691.2-201ENST00000618824 433 ntBASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 AL353726.2-201ENST00000623259 884 ntBASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 AL805961.1-201ENST00000642026 753 ntBASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 FRMPD2B-201ENST00000431305 1347 ntBASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.16■□□□□ 0.34
SHROOM1Q2M3G4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 RNA5SP359-201ENST00000364838 113 ntBASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 AL627231.1-201ENST00000394467 1125 ntBASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 PHBP15-201ENST00000574228 665 ntBASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 AP003419.4-201ENST00000616071 517 ntBASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 MIR6727-201ENST00000620702 65 ntBASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 AC018442.1-201ENST00000421439 2061 ntBASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHROOM1Q2M3G4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SHROOM1Q2M3G4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SHROOM1Q2M3G4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.14■□□□□ 0.33
SHROOM1Q2M3G4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms