Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 AL136379.1-201ENST00000623471 2642 ntBASIC16.32■□□□□ 0.2
KCNA1Q09470 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.31■□□□□ 0.2
KCNA1Q09470 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KCNA1Q09470 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KCNA1Q09470 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.31■□□□□ 0.2
KCNA1Q09470 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.31■□□□□ 0.2
KCNA1Q09470 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.31■□□□□ 0.2
KCNA1Q09470 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.31■□□□□ 0.2
KCNA1Q09470 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 CHMP1AP1-201ENST00000445563 662 ntBASIC16.31■□□□□ 0.2
KCNA1Q09470 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.31■□□□□ 0.2
KCNA1Q09470 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.31■□□□□ 0.2
KCNA1Q09470 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.31■□□□□ 0.2
KCNA1Q09470 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.31■□□□□ 0.2
KCNA1Q09470 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.31■□□□□ 0.2
KCNA1Q09470 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.31■□□□□ 0.2
KCNA1Q09470 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KCNA1Q09470 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.31■□□□□ 0.2
KCNA1Q09470 PPY2P-201ENST00000582808 702 ntBASIC16.31■□□□□ 0.2
KCNA1Q09470 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.31■□□□□ 0.2
KCNA1Q09470 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.31■□□□□ 0.2
KCNA1Q09470 AP001002.3-201ENST00000623482 206 ntBASIC16.31■□□□□ 0.2
KCNA1Q09470 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KCNA1Q09470 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
KCNA1Q09470 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.31■□□□□ 0.2
KCNA1Q09470 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KCNA1Q09470 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KCNA1Q09470 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 GK-202ENST00000378941 458 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNA1Q09470 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 ATP5G2P4-201ENST00000442175 420 ntBASIC16.3■□□□□ 0.2
KCNA1Q09470 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 BNIP3P42-201ENST00000454982 569 ntBASIC16.3■□□□□ 0.2
KCNA1Q09470 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNA1Q09470 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.3■□□□□ 0.2
KCNA1Q09470 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNA1Q09470 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNA1Q09470 BNIP3P29-201ENST00000598302 571 ntBASIC16.3■□□□□ 0.2
KCNA1Q09470 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.3■□□□□ 0.2
KCNA1Q09470 AC011447.5-201ENST00000616168 564 ntBASIC16.3■□□□□ 0.2
KCNA1Q09470 AC002472.3-201ENST00000640124 621 ntBASIC16.3■□□□□ 0.2
KCNA1Q09470 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KCNA1Q09470 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.3■□□□□ 0.2
KCNA1Q09470 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.3■□□□□ 0.2
KCNA1Q09470 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KCNA1Q09470 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms