Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP1Q04837 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SSBP1Q04837 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP1Q04837 CES1P1-201ENST00000421606 1704 ntBASIC12.59□□□□□ -0.39
SSBP1Q04837 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP1Q04837 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 AC024075.2-201ENST00000598112 1473 ntBASIC12.59□□□□□ -0.39
SSBP1Q04837 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 AC083964.2-201ENST00000623988 2396 ntBASIC12.59□□□□□ -0.39
SSBP1Q04837 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 CR383656.2-201ENST00000548656 2254 ntBASIC12.59□□□□□ -0.39
SSBP1Q04837 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSBP1Q04837 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.59□□□□□ -0.39
SSBP1Q04837 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SSBP1Q04837 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SSBP1Q04837 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP1Q04837 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP1Q04837 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP1Q04837 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 AL080243.2-201ENST00000418783 582 ntBASIC12.59□□□□□ -0.39
SSBP1Q04837 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP1Q04837 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP1Q04837 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP1Q04837 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
SSBP1Q04837 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.59□□□□□ -0.39
SSBP1Q04837 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.59□□□□□ -0.39
SSBP1Q04837 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.59□□□□□ -0.39
SSBP1Q04837 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.59□□□□□ -0.39
SSBP1Q04837 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSBP1Q04837 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSBP1Q04837 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP1Q04837 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSBP1Q04837 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SSBP1Q04837 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 CETN4P-206ENST00000642099 2168 ntBASIC12.59□□□□□ -0.39
SSBP1Q04837 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SSBP1Q04837 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.59□□□□□ -0.39
SSBP1Q04837 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP1Q04837 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP1Q04837 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SSBP1Q04837 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SSBP1Q04837 KHSRPP1-201ENST00000427983 1768 ntBASIC12.58□□□□□ -0.39
SSBP1Q04837 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.58□□□□□ -0.39
SSBP1Q04837 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.58□□□□□ -0.39
SSBP1Q04837 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 AL136172.1-201ENST00000598590 1394 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP1Q04837 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SSBP1Q04837 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 AL391647.1-201ENST00000395664 511 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP1Q04837 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP1Q04837 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 AC009474.1-201ENST00000455096 1565 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP1Q04837 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP1Q04837 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SSBP1Q04837 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP1Q04837 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP1Q04837 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SSBP1Q04837 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP1Q04837 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP1Q04837 DUX4L47-201ENST00000566374 394 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms