Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.56□□□□□ -0.08
CDK3Q00526 FNTAP2-201ENST00000430308 634 ntBASIC14.56□□□□□ -0.08
CDK3Q00526 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.56□□□□□ -0.08
CDK3Q00526 EIF4HP1-201ENST00000453115 687 ntBASIC14.56□□□□□ -0.08
CDK3Q00526 AC104073.2-201ENST00000453737 312 ntBASIC14.56□□□□□ -0.08
CDK3Q00526 RPL18P13-201ENST00000478088 569 ntBASIC14.56□□□□□ -0.08
CDK3Q00526 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.56□□□□□ -0.08
CDK3Q00526 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.56□□□□□ -0.08
CDK3Q00526 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.56□□□□□ -0.08
CDK3Q00526 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.56□□□□□ -0.08
CDK3Q00526 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.56□□□□□ -0.08
CDK3Q00526 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDK3Q00526 AC013355.1-201ENST00000562625 723 ntBASIC14.56□□□□□ -0.08
CDK3Q00526 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.56□□□□□ -0.08
CDK3Q00526 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.56□□□□□ -0.08
CDK3Q00526 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.56□□□□□ -0.08
CDK3Q00526 AC068587.8-201ENST00000641239 219 ntBASIC14.56□□□□□ -0.08
CDK3Q00526 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CDK3Q00526 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.56□□□□□ -0.08
CDK3Q00526 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDK3Q00526 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CDK3Q00526 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
CDK3Q00526 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDK3Q00526 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 AC139712.1-201ENST00000378256 1875 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 CICP14-201ENST00000629111 2732 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CDK3Q00526 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.55□□□□□ -0.08
CDK3Q00526 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.55□□□□□ -0.08
CDK3Q00526 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.55□□□□□ -0.08
CDK3Q00526 AC016700.1-201ENST00000429424 312 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 CALR4P-201ENST00000431943 946 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 AL157407.1-201ENST00000435784 904 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 AL645933.1-201ENST00000440087 609 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.55□□□□□ -0.08
CDK3Q00526 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.55□□□□□ -0.08
CDK3Q00526 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.55□□□□□ -0.08
CDK3Q00526 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.55□□□□□ -0.08
CDK3Q00526 AC103988.2-201ENST00000561804 725 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.55□□□□□ -0.08
CDK3Q00526 AC005962.1-201ENST00000584100 773 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.55□□□□□ -0.08
CDK3Q00526 AC090164.2-201ENST00000611487 516 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.55□□□□□ -0.08
CDK3Q00526 AP000346.4-201ENST00000614827 381 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 AL136295.7-201ENST00000619226 1200 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 AL139099.5-201ENST00000635274 300 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CDK3Q00526 KRT8P28-201ENST00000433288 1390 ntBASIC14.55□□□□□ -0.08
CDK3Q00526 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.55□□□□□ -0.08
CDK3Q00526 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.55□□□□□ -0.08
CDK3Q00526 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.55□□□□□ -0.08
CDK3Q00526 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDK3Q00526 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CDK3Q00526 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDK3Q00526 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDK3Q00526 MBLAC2-202ENST00000514906 1936 ntBASIC14.54□□□□□ -0.08
CDK3Q00526 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.54□□□□□ -0.08
CDK3Q00526 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.54□□□□□ -0.08
CDK3Q00526 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDK3Q00526 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDK3Q00526 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms