Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SRPXP78539 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 MYADML-201ENST00000474610 2147 ntBASIC12.3□□□□□ -0.44
SRPXP78539 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.3□□□□□ -0.44
SRPXP78539 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.3□□□□□ -0.44
SRPXP78539 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
SRPXP78539 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.3□□□□□ -0.44
SRPXP78539 AC040169.1-201ENST00000565382 521 ntBASIC12.3□□□□□ -0.44
SRPXP78539 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.3□□□□□ -0.44
SRPXP78539 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.3□□□□□ -0.44
SRPXP78539 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.3□□□□□ -0.44
SRPXP78539 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
SRPXP78539 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SRPXP78539 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SRPXP78539 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.3□□□□□ -0.44
SRPXP78539 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SRPXP78539 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.3□□□□□ -0.44
SRPXP78539 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 AC215219.1-201ENST00000400706 1817 ntBASIC12.3□□□□□ -0.44
SRPXP78539 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.3□□□□□ -0.44
SRPXP78539 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.3□□□□□ -0.44
SRPXP78539 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.3□□□□□ -0.44
SRPXP78539 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.3□□□□□ -0.44
SRPXP78539 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SRPXP78539 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.29□□□□□ -0.44
SRPXP78539 CICP8-201ENST00000455800 2813 ntBASIC12.29□□□□□ -0.44
SRPXP78539 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.29□□□□□ -0.44
SRPXP78539 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SRPXP78539 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.29□□□□□ -0.44
SRPXP78539 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.29□□□□□ -0.44
SRPXP78539 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SRPXP78539 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SRPXP78539 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.29□□□□□ -0.44
SRPXP78539 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.29□□□□□ -0.44
SRPXP78539 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms