Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.58□□□□□ -0.24
CXCR4P61073 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.58□□□□□ -0.24
CXCR4P61073 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.58□□□□□ -0.24
CXCR4P61073 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.58□□□□□ -0.24
CXCR4P61073 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.58□□□□□ -0.24
CXCR4P61073 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.58□□□□□ -0.24
CXCR4P61073 AP001059.3-201ENST00000619053 235 ntBASIC13.58□□□□□ -0.24
CXCR4P61073 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.58□□□□□ -0.24
CXCR4P61073 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CXCR4P61073 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CXCR4P61073 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 AC072061.1-201ENST00000569710 2234 ntBASIC13.58□□□□□ -0.24
CXCR4P61073 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CXCR4P61073 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CXCR4P61073 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CXCR4P61073 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CXCR4P61073 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
CXCR4P61073 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CXCR4P61073 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.57□□□□□ -0.24
CXCR4P61073 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.57□□□□□ -0.24
CXCR4P61073 RPL37AP1-201ENST00000412502 279 ntBASIC13.57□□□□□ -0.24
CXCR4P61073 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.57□□□□□ -0.24
CXCR4P61073 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CXCR4P61073 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.57□□□□□ -0.24
CXCR4P61073 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CXCR4P61073 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.57□□□□□ -0.24
CXCR4P61073 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.57□□□□□ -0.24
CXCR4P61073 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CXCR4P61073 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CXCR4P61073 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCR4P61073 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCR4P61073 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCR4P61073 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms