Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLDN20P56880 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 DGCR9-201ENST00000609630 2415 ntBASIC13.7□□□□□ -0.22
CLDN20P56880 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN20P56880 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN20P56880 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN20P56880 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLDN20P56880 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CLDN20P56880 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CLDN20P56880 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 C2orf27AP3-201ENST00000434123 579 ntBASIC13.69□□□□□ -0.22
CLDN20P56880 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 CTBP2P5-201ENST00000454986 1264 ntBASIC13.69□□□□□ -0.22
CLDN20P56880 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CLDN20P56880 AC119751.2-201ENST00000504529 210 ntBASIC13.69□□□□□ -0.22
CLDN20P56880 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN20P56880 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN20P56880 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 AC025279.2-201ENST00000569730 653 ntBASIC13.69□□□□□ -0.22
CLDN20P56880 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN20P56880 MIR6805-201ENST00000615055 62 ntBASIC13.69□□□□□ -0.22
CLDN20P56880 AL354718.3-201ENST00000616414 581 ntBASIC13.69□□□□□ -0.22
CLDN20P56880 CR382287.1-201ENST00000623954 586 ntBASIC13.69□□□□□ -0.22
CLDN20P56880 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN20P56880 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN20P56880 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN20P56880 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLDN20P56880 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN20P56880 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CLDN20P56880 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CLDN20P56880 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN20P56880 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
CLDN20P56880 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN20P56880 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN20P56880 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN20P56880 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN20P56880 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN20P56880 EIF3FP3-201ENST00000434851 1086 ntBASIC13.68□□□□□ -0.22
CLDN20P56880 KLF2P4-201ENST00000451959 1225 ntBASIC13.68□□□□□ -0.22
CLDN20P56880 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms