Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH13P55290 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH13P55290 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH13P55290 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CDH13P55290 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDH13P55290 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH13P55290 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH13P55290 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH13P55290 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CDH13P55290 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 AL442647.2-201ENST00000429864 857 ntBASIC14.59□□□□□ -0.07
CDH13P55290 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH13P55290 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.59□□□□□ -0.07
CDH13P55290 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CDH13P55290 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH13P55290 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH13P55290 AC123567.1-201ENST00000548294 1261 ntBASIC14.59□□□□□ -0.07
CDH13P55290 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 SALL4P5-201ENST00000419001 1760 ntBASIC14.59□□□□□ -0.07
CDH13P55290 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
CDH13P55290 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CDH13P55290 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH13P55290 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDH13P55290 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CDH13P55290 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.58□□□□□ -0.07
CDH13P55290 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH13P55290 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH13P55290 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CDH13P55290 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDH13P55290 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH13P55290 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CDH13P55290 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH13P55290 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.58□□□□□ -0.07
CDH13P55290 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.58□□□□□ -0.07
CDH13P55290 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH13P55290 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.58□□□□□ -0.07
CDH13P55290 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDH13P55290 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDH13P55290 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH13P55290 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CDH13P55290 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
CDH13P55290 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms