Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H2P55055 AL358472.5-202ENST00000641448 1267 ntBASIC14.21□□□□□ -0.13
NR1H2P55055 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.21□□□□□ -0.13
NR1H2P55055 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NR1H2P55055 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H2P55055 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H2P55055 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H2P55055 AP000845.1-201ENST00000581677 2131 ntBASIC14.21□□□□□ -0.13
NR1H2P55055 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H2P55055 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NR1H2P55055 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
NR1H2P55055 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NR1H2P55055 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
NR1H2P55055 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.2□□□□□ -0.14
NR1H2P55055 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NR1H2P55055 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NR1H2P55055 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
NR1H2P55055 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.2□□□□□ -0.14
NR1H2P55055 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.2□□□□□ -0.14
NR1H2P55055 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.2□□□□□ -0.14
NR1H2P55055 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.2□□□□□ -0.14
NR1H2P55055 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 AC024267.1-201ENST00000582320 895 ntBASIC14.2□□□□□ -0.14
NR1H2P55055 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.2□□□□□ -0.14
NR1H2P55055 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.2□□□□□ -0.14
NR1H2P55055 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 KRT8P22-201ENST00000562317 1415 ntBASIC14.2□□□□□ -0.14
NR1H2P55055 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
NR1H2P55055 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NR1H2P55055 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.2□□□□□ -0.14
NR1H2P55055 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H2P55055 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H2P55055 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NR1H2P55055 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NR1H2P55055 AC063926.2-201ENST00000623766 1308 ntBASIC14.19□□□□□ -0.14
NR1H2P55055 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
NR1H2P55055 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.19□□□□□ -0.14
NR1H2P55055 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NR1H2P55055 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NR1H2P55055 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H2P55055 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NR1H2P55055 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
NR1H2P55055 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 AC022144.1-201ENST00000602255 1580 ntBASIC14.19□□□□□ -0.14
NR1H2P55055 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NR1H2P55055 AL731571.1-201ENST00000617058 5428 ntBASIC14.19□□□□□ -0.14
NR1H2P55055 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NR1H2P55055 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NR1H2P55055 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.19□□□□□ -0.14
NR1H2P55055 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H2P55055 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.19□□□□□ -0.14
NR1H2P55055 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.19□□□□□ -0.14
NR1H2P55055 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.19□□□□□ -0.14
NR1H2P55055 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.19□□□□□ -0.14
NR1H2P55055 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H2P55055 AL138828.2-201ENST00000615812 383 ntBASIC14.19□□□□□ -0.14
NR1H2P55055 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.19□□□□□ -0.14
NR1H2P55055 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H2P55055 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms