Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PDX1P52945 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PDX1P52945 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDX1P52945 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.45□□□□□ -0.1
PDX1P52945 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
PDX1P52945 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.44□□□□□ -0.1
PDX1P52945 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PDX1P52945 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PDX1P52945 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PDX1P52945 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.44□□□□□ -0.1
PDX1P52945 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.44□□□□□ -0.1
PDX1P52945 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PDX1P52945 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.44□□□□□ -0.1
PDX1P52945 GHSR-202ENST00000427970 912 ntBASIC14.44□□□□□ -0.1
PDX1P52945 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.44□□□□□ -0.1
PDX1P52945 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.44□□□□□ -0.1
PDX1P52945 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.44□□□□□ -0.1
PDX1P52945 AC024681.1-201ENST00000521917 487 ntBASIC14.44□□□□□ -0.1
PDX1P52945 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.44□□□□□ -0.1
PDX1P52945 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.44□□□□□ -0.1
PDX1P52945 MIR4722-201ENST00000578292 60 ntBASIC14.44□□□□□ -0.1
PDX1P52945 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.44□□□□□ -0.1
PDX1P52945 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 AL358472.3-201ENST00000608147 415 ntBASIC14.44□□□□□ -0.1
PDX1P52945 AC091544.8-201ENST00000619490 361 ntBASIC14.44□□□□□ -0.1
PDX1P52945 AL023803.2-201ENST00000620080 638 ntBASIC14.44□□□□□ -0.1
PDX1P52945 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
PDX1P52945 AL162426.1-201ENST00000624141 743 ntBASIC14.44□□□□□ -0.1
PDX1P52945 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.44□□□□□ -0.1
PDX1P52945 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 LINC00528-201ENST00000600723 2160 ntBASIC14.44□□□□□ -0.1
PDX1P52945 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.44□□□□□ -0.1
PDX1P52945 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PDX1P52945 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.44□□□□□ -0.1
PDX1P52945 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.44□□□□□ -0.1
PDX1P52945 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PDX1P52945 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.44□□□□□ -0.1
PDX1P52945 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDX1P52945 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.43□□□□□ -0.1
PDX1P52945 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.43□□□□□ -0.1
PDX1P52945 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.43□□□□□ -0.1
PDX1P52945 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.43□□□□□ -0.1
PDX1P52945 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.43□□□□□ -0.1
PDX1P52945 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 RN7SKP175-201ENST00000408472 289 ntBASIC14.43□□□□□ -0.1
PDX1P52945 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.43□□□□□ -0.1
PDX1P52945 AL133466.1-201ENST00000447582 150 ntBASIC14.43□□□□□ -0.1
PDX1P52945 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.43□□□□□ -0.1
PDX1P52945 AC021723.1-201ENST00000486306 515 ntBASIC14.43□□□□□ -0.1
PDX1P52945 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.43□□□□□ -0.1
PDX1P52945 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.43□□□□□ -0.1
PDX1P52945 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.43□□□□□ -0.1
PDX1P52945 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.43□□□□□ -0.1
PDX1P52945 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.43□□□□□ -0.1
PDX1P52945 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.43□□□□□ -0.1
PDX1P52945 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDX1P52945 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.43□□□□□ -0.1
PDX1P52945 AC009955.4-201ENST00000597192 544 ntBASIC14.43□□□□□ -0.1
PDX1P52945 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.43□□□□□ -0.1
PDX1P52945 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PDX1P52945 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms