Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 TMEM14DP-201ENST00000422205 345 ntBASIC13.28□□□□□ -0.28
CSNK1A1P48729 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 AC025279.2-201ENST00000569730 653 ntBASIC13.28□□□□□ -0.28
CSNK1A1P48729 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 BTNL10-201ENST00000595971 695 ntBASIC13.28□□□□□ -0.28
CSNK1A1P48729 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 AC003102.2-201ENST00000589195 1469 ntBASIC13.28□□□□□ -0.28
CSNK1A1P48729 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.28□□□□□ -0.28
CSNK1A1P48729 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CSNK1A1P48729 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1A1P48729 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1A1P48729 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.27□□□□□ -0.28
CSNK1A1P48729 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CSNK1A1P48729 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.27□□□□□ -0.28
CSNK1A1P48729 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1A1P48729 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1A1P48729 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.27□□□□□ -0.28
CSNK1A1P48729 AC113367.3-201ENST00000508316 1912 ntBASIC13.27□□□□□ -0.28
CSNK1A1P48729 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1A1P48729 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CSNK1A1P48729 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1A1P48729 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CSNK1A1P48729 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CSNK1A1P48729 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CSNK1A1P48729 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.27□□□□□ -0.28
CSNK1A1P48729 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
CSNK1A1P48729 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.27□□□□□ -0.29
CSNK1A1P48729 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 KRT43P-201ENST00000434019 910 ntBASIC13.27□□□□□ -0.29
CSNK1A1P48729 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 AC005225.4-201ENST00000557330 545 ntBASIC13.27□□□□□ -0.29
CSNK1A1P48729 LINC02084-201ENST00000606069 1096 ntBASIC13.27□□□□□ -0.29
CSNK1A1P48729 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 AC012645.4-201ENST00000610691 1061 ntBASIC13.27□□□□□ -0.29
CSNK1A1P48729 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 CLUHP2-201ENST00000426660 1303 ntBASIC13.27□□□□□ -0.29
CSNK1A1P48729 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CSNK1A1P48729 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.27□□□□□ -0.29
CSNK1A1P48729 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CSNK1A1P48729 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CSNK1A1P48729 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms