Protein–RNA interactions for Protein: P48728

AMT, Aminomethyltransferase, mitochondrial, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMTP48728 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
AMTP48728 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.3□□□□□ -0.6
AMTP48728 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.3□□□□□ -0.6
AMTP48728 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.3□□□□□ -0.6
AMTP48728 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
AMTP48728 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AMTP48728 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AMTP48728 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
AMTP48728 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
AMTP48728 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
AMTP48728 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.3□□□□□ -0.6
AMTP48728 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.3□□□□□ -0.6
AMTP48728 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
AMTP48728 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
AMTP48728 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
AMTP48728 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
AMTP48728 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
AMTP48728 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 RPL5P21-201ENST00000404620 815 ntBASIC11.29□□□□□ -0.6
AMTP48728 CRYGEP-201ENST00000412192 528 ntBASIC11.29□□□□□ -0.6
AMTP48728 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.29□□□□□ -0.6
AMTP48728 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.29□□□□□ -0.6
AMTP48728 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.29□□□□□ -0.6
AMTP48728 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.29□□□□□ -0.6
AMTP48728 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.29□□□□□ -0.6
AMTP48728 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
AMTP48728 AC109635.5-201ENST00000533593 962 ntBASIC11.29□□□□□ -0.6
AMTP48728 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.29□□□□□ -0.6
AMTP48728 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.29□□□□□ -0.6
AMTP48728 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.29□□□□□ -0.6
AMTP48728 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.29□□□□□ -0.6
AMTP48728 AL121912.1-201ENST00000603683 238 ntBASIC11.29□□□□□ -0.6
AMTP48728 AL078644.1-201ENST00000609881 752 ntBASIC11.29□□□□□ -0.6
AMTP48728 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.29□□□□□ -0.6
AMTP48728 AL445209.1-201ENST00000607269 3491 ntBASIC11.29□□□□□ -0.6
AMTP48728 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
AMTP48728 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
AMTP48728 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 PMS2P7-201ENST00000506558 1336 ntBASIC11.29□□□□□ -0.6
AMTP48728 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.29□□□□□ -0.6
AMTP48728 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.29□□□□□ -0.6
AMTP48728 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
AMTP48728 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
AMTP48728 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.28□□□□□ -0.6
AMTP48728 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
AMTP48728 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.28□□□□□ -0.6
AMTP48728 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
AMTP48728 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AMTP48728 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
AMTP48728 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
AMTP48728 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
AMTP48728 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms