Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC6A12P48065 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC011498.7-201ENST00000624986 2027 ntBASIC14.29□□□□□ -0.12
SLC6A12P48065 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
SLC6A12P48065 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC6A12P48065 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 CROCCP4-201ENST00000457096 498 ntBASIC14.29□□□□□ -0.12
SLC6A12P48065 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.29□□□□□ -0.12
SLC6A12P48065 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC106886.1-201ENST00000568660 600 ntBASIC14.29□□□□□ -0.12
SLC6A12P48065 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AL358472.3-201ENST00000608147 415 ntBASIC14.29□□□□□ -0.12
SLC6A12P48065 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC6A12P48065 RHOXF1P1-202ENST00000635473 501 ntBASIC14.29□□□□□ -0.12
SLC6A12P48065 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC020910.6-201ENST00000623084 1459 ntBASIC14.29□□□□□ -0.12
SLC6A12P48065 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SLC6A12P48065 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC016397.2-201ENST00000624848 1985 ntBASIC14.29□□□□□ -0.12
SLC6A12P48065 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
SLC6A12P48065 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SLC6A12P48065 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SLC6A12P48065 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SLC6A12P48065 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SLC6A12P48065 MIR1202-201ENST00000408529 83 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC6A12P48065 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC6A12P48065 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC6A12P48065 RPL7P3-201ENST00000441388 714 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 CHMP1AP1-201ENST00000445563 662 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 GAPDHP21-201ENST00000450301 1010 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC6A12P48065 PDIA3P1-201ENST00000471856 1510 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.28□□□□□ -0.12
SLC6A12P48065 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC6A12P48065 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC6A12P48065 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.28□□□□□ -0.12
SLC6A12P48065 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 SORD2P-201ENST00000558556 1069 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.28□□□□□ -0.12
SLC6A12P48065 AC008825.2-201ENST00000603374 718 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 ZACNP1-201ENST00000612259 710 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.28□□□□□ -0.12
SLC6A12P48065 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.28□□□□□ -0.12
SLC6A12P48065 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC6A12P48065 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms